Information for HuBMAP data providers

Data Submission Guide

Please see the HuBMAP Data Submission Guide for detailed instructions on the process of submitting data to HuBMAP.

Before you submit data

There are several prerequisites to successfully submitting data to HuBMAP.

Consent and Data Use Agreements on record

Your component must have submitted completed Consent and Data Use Agreements to the Consortium.
Data Use Agreement

Access to HuBMAP space in Globus

You must have access to upload data to HuBMAP folders in Globus. Note that your Globus identity must be associated with an institution or with your NIH eRA Commons account. You cannot use a gmail or an ORCID Globus identity for HuBMAP.

Globus access also provides you with access to the HuBMAP ingest portal.
How to get Globus access

Membership in the HuBMAP workspace in GitHub

You must be a member of the HuBMAP workspace in GitHub to prepare files for submission.
How to get GitHub access

Membership in the HuBMAP workspace in protocols.io

HuBMAP requires that all protocols be publicly available through the HuBMAP Method Development Community on protocols.io. You must be a member of this workspace to publish your protocols there.
How to become a HuBMAP research group member on protocols.io

Data modalities

See the Data Modality summary spreadsheet.

Questions

If you have questions at any time, please email help@hubmapconsortium.org.


 

Return to Member portal home.
Sorry, but you do not have permission to view this content.
Collaboration Portal