This week’s image comes from Seth Currlin at TMC-University of Florida. This is a lightsheet microscopy image of a human splenic blood vessel (cyan) surrounded by the tyrosine hydroxylase matrix (red) from the axons that innervate the blood vessel. If you have any questions, be sure to contact Seth and he’ll be happy to "ex-pleen".
We would like to thank the submitters of our previous images, which have each received considerable attention on the NIH Instagram site here and here. Keep up the great work, and keep these images coming!
Portal Survey
You are invited and encouraged to provide feedback on the portal via this Qualtrics survey:
If you would like to attend but don't see a Zoom invite in your calendar, please register and share more info on your expertisehere.
Demo Day Follow-up
Slides, recordings and posters from the Sept. 20-21 Demo Day can be found both on the eventwebsiteand in the HuBMAP Consortium Drivehere.
Dear Dena
Dear Dena,
I’m a new member of HuBMAP and I'm a bit overwhelmed (in general - but mostly regarding this project). There's so many moving parts and people involved! With so many working groups, where do I even start?!
Signed,
Any chance there's a HuBMAP Map?
Dear Let Me Show You the Way,
Fret not! We know that joining a Consortium Project already in progress (let alone amidst a global pandemic) can indeed be a bit overwhelming, but we're here to help!
First, be sure that you attend the General Orientation callson Wednesday, October 14, 2020 at 2:00pm EDT and the Data Orientation callson Wednesday, October 28, 2020 at 2:00pm EDT.
These will tell you about the resources available to you, the structure of the Consortium and the workgroups you can join.
If you would like to join a working group, please email me or help@hubmapconsortium.org and we will add you to the list and send calendar invitations.
You’ll be one of us soon! (evil laugh follows...)
Welcome to Our Newly Funded TMCs & TTDs!
TMC
PNNL - Multi-omic 3D tissue maps for a Human BioMolecular Atlas
U Penn - Penn Center for Multi-scale Molecular Mapping of the Female Reproductive System
UCSD- Female Reproductive Tissue Mapping Center
U Conn - High resolution 3D mapping of cellular heterogeneity within multiple types of mineralized tissues
Vanderbilt - Biomolecular Multimodal Imaging Center: 3-Dimensional Tissue Mapping of the Human Pancreas and Eye
Children’s Hospital of Philly - Center for Developmental Mapping of Heart and Bone Tissues
TTD
Yale - High-spatial-resolution ECM-inclusive multi-omics sequencing of human PFA and FFPE tissue slides
PNNL - Spatially resolved characterization of proteoforms for functional proteomics
PNNL/Northwestern - A streamlined platform for phosphoproteome mapping of human tissues
Columbia - Multimodal mass spectrometry imaging of mouse and human liver
UCSD - Spatial in situ mapping of RNA-chormatin interactions at transcriptome-and-genome scale in human tissues
Stay tuned for more in-depth introductions in future Happenings!
What's the most expensive video streaming service currently available?
College.
HIVE Infrastructure
Developers in need of HIVE infrastructure may request access through the PSC web form, foundhere.
Instructions for using HIVE infrastructure can now be found in the "Quick Links" section of the Collaboration Portal. A direct link to this documentation can be found here. Please report any issues or direct any questions to help@hubmapconsortium.org.
Content Suggestions
The IEC is seeking to collect information of general interest from individual members and groups to share with the rest of the Consortium. Please submit content suggestions by emailing admin@hubmapconsortium.org.
Past Newsletters are available on the Collaboration Portal.
For comments, suggestions about how to improve the HuBMAP Happenings, or questions about the consortium, please contact: help@hubmapconsortium.org
