And once again, it’s time for the Image of the week! This week’s image comes from John Hickey at @stanfordmedlab's Snyder Lab where he used CODEX imaging to map 7 proteins in healthy human small intestine.
Are you looking for fame and notoriety? Send your best images to firstname.lastname@example.org.
Cell Atlas Curation Working Group Call
The next Cell Atlas Curation Working Group call will be held on January 12 @ 10AM EST.
HTAN: ??? ask for a link to the workflow. Free-text description, parameters, commands, when run, workflow/software-versions.
RFI on National Strategic Computing Reserve
The Request for Information (RFI) on Potential Concepts and Approaches for a National Strategic Computing Reserve (NSCR) was just released by NITRD, through NSF, and in collaboration with OSTP and the NSTC’s Future Advanced Computing Ecosystem Subcommittee.
The RFI requests information from interested parties on the goals, value, and necessary approaches for establishing a NSCR. The NSCR may be envisioned as a coalition of experts and resource providers that could be mobilized quickly to provide critical computational resources (including compute, software, data, and technical expertise) in times of urgent need. This RFI will help OSTP and the FACE and NITRD Subcommittees with the potential design of a NSCR effort.
The RFI is available here. The closing date is January 16, 2021.
Pacific Northwest National Laboratory
The Environmental Molecular Sciences Division at Pacific Northwest National Laboratory (PNNL) seeks for an outstanding candidate for a postdoctoral position working on projects associated with biological applications of high throughput and quantitative proteome mapping of tissue heterogeneity of the pancreas at near single-cell resolution.
Immediately following the HuBMAP Steering Committee call (Monday, January 11 @ 2PM) the monthly Sci/Tech webinar will take place. Additional information on the presenters and a calendar invite will be sent later this week.
This year, the Internal Sci-Tech Webinars will serve as a platform for the consortium collaborative projects to provide project updates to our membership. In an effort to ensure that everyone has the opportunity to speak and to distribute the speakers for project timelines, we've assigned each group with a Sci-Tech Webinar speaking slot. The full schedule can be found here. *Please reference the schedule to see when your group is presenting.*
VHMOOC Ontologies 101 Video
Check out the newly released video, produced by HuBMAP associate member Mark Musen, that provides an introduction to ontologies - what they are, how they're used and why they're important in BioMed applications (for HuBMAP in particular). Link to the video here.
HeartShare: Next-Generation Phenomics to Define Heart Failure Subtypes and Treatment Targets (RFA)
Developers in need of HIVE infrastructure may request access through the PSC web form, found here.
Instructions for using HIVE infrastructure can now be found in the "Quick Links" section of the Collaboration Portal. A direct link to this documentation can be foundhere. Please report any issues or direct any questions email@example.com.
The IEC is seeking to collect information of general interest from individual members and groups to share with the rest of the Consortium. Please submit content suggestions by emailing: firstname.lastname@example.org.
Past Newsletters are available on the Collaboration Portal.
For comments, suggestions about how to improve the HuBMAP Happenings, or questions about the consortium, please contact: email@example.com